Protein ZmBSD9 | |
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Information | |
TF Name: | ZmBSD9 |
Species: | Maize |
TF Family: | BSD |
Gene Name(Synonym): | BSDTF9 |
Uniprot ID: | B4FNU7 |
Subgenome: | 1 |
ZmBSD9 is a protein in the BSD family.
Overview of domains present in v5 transcripts | |
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PF03909 | |
Zm00001eb375210_T001 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d045155 | DAPseq | sequence | fimo | position | |
Zm00001d045155 | DAPseq | sequence | fimo | position | |
Zm00001d045155 | ChIPseq | sequence | fimo | position | |
Zm00001d045155 | PChIPseq | sequence | fimo | position |
MARGLRGVRDDLSELGRHLLDIACFLHPLLNPAHTDSPPPTPTGRRRPRRSPSPHPAAPPSPSLLAGILSDLAEIGGSFR
GGFSRSSPAPDHPAPDALESQQAASSPSPRPPPPAAADQIADDVVGAARALAARPEAWIDFPVLALDEGSVISGIQRDHM
ESIEKLVPDLASLRGRLCPSYMDEDIFWKIYFRLLESNINEHSSEEDIRSVPNSVHHNNEIESDSPPHVCEIESVKSNQE
GYQSSDGRAFPKTRSERSIDQWVFAKSKSEESMDQWSEIPSDVESFREGKRYLSSEELSDVDSANVVVMDKYMDSLLSDR
RNLPYASSSVRRDSVRRKPASSADYSRRPPQPTPPASLSKKESWDVIEDSEFDILDS
MARGLRGVRDDLSELGRHLLDIACFLHPLLNPAHTDSPPPTPTGRRRPRRSPSPHPAAPPSPSLLAGILSDLAEIGGSFR
GGFSRSSPAPDHPAPDALESQQAASSPSPRPPPPAAADQIADDVVGAARALAARPEAWIDFPVLALDEGSVISGIQRDHM
ESIEKLVPDLASLRGRLCPSYMDEDIFWKIYFRLLESNINEHSSEEDIRSVPNSVHHNNEIESDSPPHVCEIESVKSNQE
GYQSSDGRAFPKTRSERSIDQWVFAKSKSEESMDQWSEIPSDVESFREGKRYLSSEELSDVDSANVVVMDKYMDSLLSDR
RNLPYASSSVRRDSVRRKPASSADYSRRPPQPTPPASLSKKESWDVIEDSEFDILDS
MARGLRGVRDDLSELGRHLLDIACFLHPLLNPAHTDSPPPTPTGRRRPRRSPSPHPAAPPSPSLLAGILSDLAEIGGSFR
GGFSRSSPAPDHPAPDALESQQAASSPSPRPPPPAAADQIADDVVGAARALAARPEAWIDFPVLALDEGSVISGIQRDHM
ESIEKLVPDLASLRGRLCPSYMDEDIFWKIYFRLLESNINEHSSEEDIRSVPNSVHHNNEIESDSPPHVCEIESVKSNQE
GYQSSDGRAFPKTRSERSIDQWVFAKSKSEESMDQWSEIPSDVESFREGKRYLSSEELSDVDSANVVVMDKYMDSLLSDR
RNLPYASSSVRRDSVRRKPASSADYSRRPPQPTPPASLSKKESWDVIEDSEFDILDS
MARGLRGVRDDLSELGRHLLDIACFLHPLLNPAHTDSPPPTPTGRRRPRRSPSPHPAAPPSPSLLAGILSDLAEIGGSFR
GGFSRSSPAPDHPAPDALESQQAASSPSPRPPPPAAADQIADDVVGAARALAARPEAWIDFPVLALDEGSVISGIQRDHM
ESIEKLVPDLASLRGRLCPSYMDEDIFWKIYFRLLESNINEHSSEEDIRSVPNSVHHNNEIESDSPPHVCEIESVKSNQE
GYQSSDGRAFPKTRSERSIDQWVFAKSKSEESMDQWSEIPSDVESFREGKRYLSSEELSDVDSANVVVMDKYMDSLLSDR
RNLPYASSSVRRDSVRRKPASSADYSRRPPQPTPPASLSKKESWDVIEDSEFDILDS
MARGLRGVRDDLSELGRHLLDIACFLHPLLNPAHTDSPPPTPTGRRRPRRSPSPHPAAPPSPSLLAGILSDLAEIGGSFR
GGFSRSSPAPDHPAPDALESQQAASSPSPRPPPPAAADQIADDVVGAARALAARPEAWIDFPVLALDEGSVISGIQRDHM
ESIEKLVPDLASLRGRLCPSYMDEDIFWKIYFRLLESNINEHSSEEDIRSVPNSVHHNNEIESDSPPHVCEIESVKSNQE
GYQSSDGRAFPKTRSERSIDQWVFAKSKSEESMDQWSEIPSDVESFREGKRYLSSEELSDVDSANVVVMDKYMDSLLSDR
RNLPYASSSVRRDSVRRKPASSADYSRRPPQPTPPASLSKKESWDVIEDSEFDILDS
Secondary Structure Color Code | |
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BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
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PF03909 |
|
Hover here to show all domains |
CACTCGCGCGCGATCACTGATCAGC...
CACTCGCGCGCGATCACTGATCAGCGAACCAACGGCGGCCCGCCCCAAGCACGTGGAGCCGGGAACCGGAAGCCTCTCTCTCCCTCCCGAGTCCGCCAGACCGCCACCCTCTTCCTGCTGCCGCAAGTCCCAATCATTGCCTCCCCCACCAAGCCCACGTCACTTCACCCCACCCACACCACGCCAAGTCGCCAAGGCAAGGCCCCCCAGCGAAAGCAAAGGGGGAAGCAACCCCCCGCACCGCGAGGCCGCAAAAGCAATCGCGAAAGCGAGCGCGAGGCGAGTCGGCCGGCGAAGGGGGCGGATGGCGCGCGGGCTGCGCGGCGTCCGCGACGACCTATCCGAGCTGGGGCGCCACCTGCTCGACATCGCCTGCTTCCTGCACCCGCTCCTCAACCCGGCCCACACCGACTCCCCGCCACCCACCCCCACGGGCCGCCGCCGCCCGCGCCGCTCCCCGTCCCCGCACCCCGCCGCGCCGCCGTCACCGTCGCTCCTCGCGGGCATCCTCTCCGACCTCGCCGAGATCGGCGGCTCCTTCCGCGGCGGCTTCTCCCGCTCCTCGCCGGCGCCCGACCACCCCGCCCCCGACGCGCTCGAGTCACAGCAGGCCGCCTCGTCCCCGTCCCCGCGTCCGCCTCCTCCTGCTGCTGCCGACCAGATCGCAGATGATGTCGTGGGAGCAGCGCGTGCCCTCGCCGCGCGGCCCGAGGCGTGGATCGACTTCCCCGTGCTCGCCCTAGATGAGGGTTCTGTAATTTCTGGTATCCAAAGAGATCATATGGAATCCATTGAAAAACTTGTCCCAGATTTAGCATCTCTACGGGGTAGGCTCTGTCCTTCTTACATGGATGAAGACATATTCTGGAAGATTTACTTTAGGTTGCTTGAGTCAAACATAAATGAGCATAGTTCTGAGGAAGATATCCGGAGCGTGCCAAATTCTGTACATCACAACAATGAGATAGAGTCTGATTCTCCACCTCACGTCTGTGAGATAGAAAGTGTGAAAAGCAACCAAGAAGGGTACCAATCTTCGGATGGTCGTGCTTTCCCCAAGACAAGATCTGAGCGAAGCATTGACCAATGGGTATTTGCAAAGTCAAAATCTGAAGAAAGCATGGATCAGTGGTCTGAAATACCTTCAGATGTGGAATCCTTCAGAGAAGGTAAAAGGTACCTCAGTAGCGAGGAGCTGAGTGACGTTGATAGTGCCAACGTTGTTGTCATGGACAAATACATGGATTCACTCCTCTCTGACCGGAGGAACCTTCCCTACGCTAGCTCCTCGGTGCGCCGGGATTCAGTCAGACGAAAACCTGCTTCGTCCGCCGATTACAGCCGCCGACCTCCGCAGCCAACTCCACCTGCATCGCTGTCAAAGAAGGAATCGTGGGATGTCATTGAAGATTCGGAGTTCGATATACTTGACAGTTAGTAATTGAGATCTTTGCGATCTCAAGGCTGTTTATCCTTCTATTTTCTTCCATGTTTCCCCACACTTCACCTCGTTTGTAAATGTGGACGTGCAGGTGGCGTCAGTGATAGTGGGAAAGGACTAATGTTCTTTTTACCAATATATTATAACAGTGTGTGCATATAAATCTTCTGAGCTCGCAAGCTGTGAGCCTCCCAGGTTAAAAGTGTTTATATGTTGGCATCATTGTTTGTTTCAGATATTTTATTGCAGAACAGAAAATTGCCACCTATCATTGCGAAAAATCTTTGTATCATTACCCTTCTCACCCTTATTTCATTCTAGTAAAG
MARGLRGVRDDLSELGRHLLDIACFLHPLLNPAHTDSPPPTPTGRRRPRRSPSPHPAAPPSPSLLAGILSDLAEIGGSFR
GGFSRSSPAPDHPAPDALESQQAASSPSPRPPPPAAADQIADDVVGAARALAARPEAWIDFPVLALDEGSVISGIQRDHM
ESIEKLVPDLASLRGRLCPSYMDEDIFWKIYFRLLESNINEHSSEEDIRSVPNSVHHNNEIESDSPPHVCEIESVKSNQE
GYQSSDGRAFPKTRSERSIDQWVFAKSKSEESMDQWSEIPSDVESFREGKRYLSSEELSDVDSANVVVMDKYMDSLLSDR
RNLPYASSSVRRDSVRRKPASSADYSRRPPQPTPPASLSKKESWDVIEDSEFDILDS
CCTCTTCCTGCTGCCGCAAGTCCCA...
CCTCTTCCTGCTGCCGCAAGTCCCAATCATTGCCTCCCCCACCAAGCCCACGTCACTTCACCCCACCCACACCACGCCAAGTCGCCAAGGCAAGGCCCCCCAGCGAAAGCAAAGGGGGAAGCAACCCCCCGCACCGCGAGGCCGCAAAAGCAATCGCGAAAGCGAGCGCGAGGCGAGTCGGCCGGCGAAGGGGGCGGATGGCGCGCGGGCTGCGCGGCGTCCGCGACGACCTATCCGAGCTGGGGCGCCACCTGCTCGACATCGCCTGCTTCCTGCACCCGCTCCTCAACCCGGCCCACACCGACTCCCCGCCACCCACCCCCACGGGCCGCCGCCGCCCGCGCCGCTCCCCGTCCCCGCACCCCGCCGCGCCGCCGTCACCGTCGCTCCTCGCGGGCATCCTCTCCGACCTCGCCGAGATCGGCGGCTCCTTCCGCGGCGGCTTCTCCCGCTCCTCGCCGGCGCCCGACCACCCCGCCCCCGACGCGCTCGAGTCACAGCAGGCCGCCTCGTCCCCGTCCCCGCGTCCGCCTCCTCCTGCTGCTGCCGACCAGATCGCAGATGATGTCGTGGGAGCAGCGCGTGCCCTCGCCGCGCGGCCCGAGGCGTGGATCGACTTCCCCGTGCTCGCCCTAGATGAGGGTTCTGTAATTTCTGGTATCCAAAGAGATCATATGGAATCCATTGAAAAACTTGTCCCAGATTTAGCATCTCTACGGGGTAGGCTCTGTCCTTCTTACATGGATGAAGACATATTCTGGAAGATTTACTTTAGGTTGCTTGAGTCAAACATAAATGAGCATAGTTCTGAGGAAGATATCCGGAGCGTGCCAAATTCTGTACATCACAACAATGAGATAGAGTCTGATTCTCCACCTCACGTCTGTGAGATAGAAAGTGTGAAAAGCAACCAAGAAGGGTACCAATCTTCGGATGGTCGTGCTTTCCCCAAGACAAGATCTGAGCGAAGCATTGACCAATGGGTATTTGCAAAGTCAAAATCTGAAGAAAGCATGGATCAGTGGTCTGAAATACCTTCAGATGTGGAATCCTTCAGAGAAGGTAAAAGGTACCTCAGTAGCGAGGAGCTGAGTGACGTTGATAGTGCCAACGTTGTTGTCATGGACAAATACATGGATTCACTCCTCTCTGACCGGAGGAACCTTCCCTACGCTAGCTCCTCGGTGCGCCGGGATTCAGTCAGACGAAAACCTGCTTCGTCCGCCGATTACAGCCGCCGACCTCCGCAGCCAACTCCACCTGCATCGCTGTCAAAGAAGGAATCGTGGGATGTCATTGAAGATTCGGAGTTCGATATACTTGACAGTTAGTAATTGAGATCTTTGCGATCTCAAGGCTGTTTATCCTTCTATTTTCTTCCATGTTTCCCCACACTTCACCTCGTTTGTAAATGTGGACGTGCAGGTGGCGTCAGTGATAGTGGGAAAGGACTAATGTTCTTTTTACCAATATATTATAACAGTGTGTGCATATAAATCTTCTGAGCTCGCAAGCTGTGAGCCTCCCAGGTTAAAAGTGTTTATATGTTGGCATCATTGTTTGTTTCAGATATTTTATTGCAGAACAGAAAATTGCCACC
LSELGRHLLDIACFLHPLLNPAHTDSPSPHPAAPPSPSLLAGILSDLRSQLHLHRCQRRNRGMSLKIRSSIYLTVSN
CTATCCGAGCTGGGGCGCCACCTGC...
CTATCCGAGCTGGGGCGCCACCTGCTCGACATCGCCTGCTTCCTGCACCCGCTCCTCAACCCGGCCCACACCGACTCCCCGTCCCCGCACCCCGCCGCGCCGCCGTCACCGTCGCTCCTCGCGGGCATCCTCTCCGACCTCCGCAGCCAACTCCACCTGCATCGCTGTCAAAGAAGGAATCGTGGGATGTCATTGAAGATTCGGAGTTCGATATACTTGACAGTTAGTAATTGAGATCTTTGCGATCTCAAGGCTGTTTATCCTTCTATTTTCTTCCATGTTTCCCCACACTTCACCTCGTTTGTAAATGTGGACGTGCAGGTGGCGTCAGTGATAGTGGGAAAGGACTAATGTTCTTTTTACCAATATATTATAACAGTGTGTGCATATAAATCTTCTGAGCTCGCAAGCTGTGAGCCTCCCAGGTTAAAAGTGTTTATATGTTGGCATCATTGTTTGTTTC
MARGLRGVRDDLSELGRHLLDIACFLHPLLNPAHTDSPPPTPTGRRRPRRSPSPHPAAPPSPSLLAGILSDLAEIGGSFR
GGFSRSSPAPDHPAPDALESQQAASSPSPRPPPPAAADQIADDVVGAARALAARPEAWIDFPVLALDEGSVISGIQRDHM
ESIEKLVPDLASLRGRLCPSYMDEDIFWKIYFRLLESNINEHSSEEDIRSVPNSVHHNNEIESDSPPHVCEIESVKSNQE
GYQSSDGRAFPKTRSERSIDQWVFAKSKSEESMDQWSEIPSDVESFREGKRYLSSEELSDVDSANVVVMDKYMDSLLSDR
RNLPYASSSVRRDSVRRKPASSADYSRRPPQPTPPASLSKKESWDVIEDSEFDILDS
CCGCCACCCTCTTCCTGCTGCCGCA...
CCGCCACCCTCTTCCTGCTGCCGCAAGTCCCAATCATTGCCTCCCCCACCAAGCCCACGTCACTTCACCCCACCCACACCACGCCAAGTCGCCAAGGCAAGGCCCCCCAGCGAAAGCAAAGGGGGAAGCAACCCCCCGCACCGCGAGGCCGCAAAAGCAATCGCGAAAGCGAGCGCGAGGCGAGTCGGCCGGCGAAGGGGGCGGATGGCGCGCGGGCTGCGCGGCGTCCGCGACGACCTATCCGAGCTGGGGCGCCACCTGCTCGACATCGCCTGCTTCCTGCACCCGCTCCTCAACCCGGCCCACACCGACTCCCCGCCACCCACCCCCACGGGCCGCCGCCGCCCGCGCCGCTCCCCGTCCCCGCACCCCGCCGCGCCGCCGTCACCGTCGCTCCTCGCGGGCATCCTCTCCGACCTCGCCGAGATCGGCGGCTCCTTCCGCGGCGGCTTCTCCCGCTCCTCGCCGGCGCCCGACCACCCCGCCCCCGACGCGCTCGAGTCACAGCAGGCCGCCTCGTCCCCGTCCCCGCGTCCGCCTCCTCCTGCTGCTGCCGACCAGATCGCAGATGATGTCGTGGGAGCAGCGCGTGCCCTCGCCGCGCGGCCCGAGGCGTGGATCGACTTCCCCGTGCTCGCCCTAGATGAGGGTTCTGTAATTTCTGGTATCCAAAGAGATCATATGGAATCCATTGAAAAACTTGTCCCAGATTTAGCATCTCTACGGGGTAGGCTCTGTCCTTCTTACATGGATGAAGACATATTCTGGAAGATTTACTTTAGGTTGCTTGAGTCAAACATAAATGAGCATAGTTCTGAGGAAGATATCCGGAGCGTGCCAAATTCTGTACATCACAACAATGAGATAGAGTCTGATTCTCCACCTCACGTCTGTGAGATAGAAAGTGTGAAAAGCAACCAAGAAGGGTACCAATCTTCGGATGGTCGTGCTTTCCCCAAGACAAGATCTGAGCGAAGCATTGACCAATGGGTATTTGCAAAGTCAAAATCTGAAGAAAGCATGGATCAGTGGTCTGAAATACCTTCAGATGTGGAATCCTTCAGAGAAGGTAAAAGGTACCTCAGTAGCGAGGAGCTGAGTGACGTTGATAGTGCCAACGTTGTTGTCATGGACAAATACATGGATTCACTCCTCTCTGACCGGAGGAACCTTCCCTACGCTAGCTCCTCGGTGCGCCGGGATTCAGTCAGACGAAAACCTGCTTCGTCCGCCGATTACAGCCGCCGACCTCCGCAGCCAACTCCACCTGCATCGCTGTCAAAGAAGGAATCGTGGGATGTCATTGAAGATTCGGAGTTCGATATACTTGACAGTTAGTAATTGAGATCTTTGCGATCTCAAGGCTGTTTATCCTTCTATTTTCTTCCATGTTTCCCCACACTTCACCTCGTTTGTAAATGTGGACGTGCAGGTGGCGTCAGTGATAGTGGGAAAGGACTAATGTTCTTTTTACCAATATATTATAACAGTGTGTGCATATAAATCTTCTGAGCTCGCAAGCTGTGAGCCTCCCAGGTTAAAAGTGTTTATATGTTGGCATCATTGTTTGTTTCAGATATTTTATTGCAGAACAGAAAATTGCCACCTATCATTGCGAAAAATCTTTGTATCATTACCCTTCTCACCCTTATTTCATTCTAGTAAAGCATTGTTATTGTCCAGTTTGGACATCAGCATTATCGAAAGACGAAGACAAGGTGATTGAGTTGCTGGATCAAATAATGTAGTAGGCTTCAGAGATTGTCCTAAGACTGTCTCCAGTAATGTTCTGTATATTCATCCTCT
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